[cctbxbb] mon_lib dependency

markus.gerstel at diamond.ac.uk markus.gerstel at diamond.ac.uk
Mon Feb 1 00:43:42 PST 2016


There is a mechanism already in place for packages such as dials and xia2 to fall back to a simple download if git is not installed on the machine. Maybe you can use that as well.

-Markus

From: cctbxbb-bounces at phenix-online.org [mailto:cctbxbb-bounces at phenix-online.org] On Behalf Of Nicholas Sauter
Sent: 30 January 2016 00:49
To: cctbx mailing list
Subject: Re: [cctbxbb] mon_lib dependency

Lothar,

Thanks for the question--this is a new issue for us.

Today you need git.

However, we will fix the dependency on git sometime in the next few days, so if you check back on Tuesday-ish, the source package will no longer use git.

Nick

Nicholas K. Sauter, Ph. D.
Computer Staff Scientist, Molecular Biophysics and Integrated Bioimaging Division
Lawrence Berkeley National Laboratory
1 Cyclotron Rd., Bldg. 33R0345
Berkeley, CA 94720
(510) 486-5713

On Fri, Jan 29, 2016 at 4:24 PM, <esserlo at helix.nih.gov<mailto:esserlo at helix.nih.gov>> wrote:
Hi Pavel,

  it is not often that I am trying to compile the source but on occasion I
want to take advantage of openmp. So I am compiling dev 2303

with

./install --openmp --prefix=/home/local/progs/Phenix/MP --source
--without-pymol --nproc=8

But it stops with

Installing lz4_plugin...
  log file is
/home/local/progs/Phenix/MP/phenix-installer-dev-2303-source/base_tmp/lz4_plugin_install_log
/bin/sh: git: command not found

Do I have to have git ?

Thanks,

  Lothar

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