[cctbxbb] Python 3.11

Billy Poon BKPoon at lbl.gov
Tue Nov 29 10:10:40 PST 2022


Do you mean to build the conda package or how to build with Python 3.11? I
am in the process of adding Python 3.11 environments to the cctbx CI so
that each commit will also be tested on Python 3.11. Once you have a Python
3.11 environment, the normal bootstrap.py process can be used for building.

--
Billy K. Poon
Research Scientist, Molecular Biophysics and Integrated Bioimaging
Lawrence Berkeley National Laboratory
1 Cyclotron Road, M/S 33R0345
Berkeley, CA 94720
Fax: (510) 486-5909
Web: https://phenix-online.org


On Tue, Nov 29, 2022 at 10:04 AM Luc Bourhis <luc_j_bourhis at mac.com> wrote:

> Hi Billy, hi Graeme,
>
> thanks. Great news! I will start testing. We use the conda distro at
> Bruker: are the steps to build it documented somewhere? It would be easier
> that way but no big deal, I can put the cctbx by hand in our environment
> for testing.
>
> Best wishes,
>
> Luc
>
>
> On 29 Nov 2022, at 18:22, Billy Poon <bkpoon at lbl.gov> wrote:
>
> Hi Luc,
>
> There are nightly Python 3.11 builds on the cctbx-nightly channel. They
> were started in early November. You can test it in a new environment with
>
> conda create -n my_env -c cctbx-nightly -c conda-forge python=3.11
> cctbx-base
>
> All the tests that are run nightly should pass (last checked on Nov 19). I
> just started a new test here (
> https://dev.azure.com/cctbx-release/cctbx/_build/results?buildId=5107&view=results).
> I will update the generally nightly tests once the Python 3.11 migrator
> hits the conda-forge package so that both the official conda-forge package
> and the nightly builds are tested nightly.
>
> The smtbx tests are passing, but let me know if you find something wrong.
> Thanks!
>
> --
> Billy K. Poon
> Research Scientist, Molecular Biophysics and Integrated Bioimaging
> Lawrence Berkeley National Laboratory
> 1 Cyclotron Road, M/S 33R0345
> Berkeley, CA 94720
> Fax: (510) 486-5909
> Web: https://phenix-online.org
>
>
> On Tue, Nov 29, 2022 at 9:00 AM Winter, Graeme (DLSLtd,RAL,LSCI) <
> Graeme.Winter at diamond.ac.uk> wrote:
>
>> I think in DIALS land it is on our to-do but not this side of the new year
>>
>> I can’t remember if we have test builds going...
>>
>> All the best Graeme
>>
>> > On 29 Nov 2022, at 13:59, Luc Bourhis <luc_j_bourhis at mac.com> wrote:
>> >
>> > Hi,
>> >
>> > may I enquire about the time table for Python 3.11 compatibility? We
>> are planning to move to it as soon as possible at Bruker, hence my question.
>> >
>> > Best wishes,
>> >
>> > Luc Bourhis
>> >
>> >
>> >
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>>
>>
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