[phenixbb] R, Rfree, and wxu_scale
Jianghai Zhu
jzhu at cbr.med.harvard.edu
Sat Aug 4 23:00:24 PDT 2007
In the manual, I have also seen examples to manually set the target
weight (target_weights.fix_wxc and target_weights.fix_wxu). But
there is no explanations for their uses. What kind of effects would
they cause?
Jianghai
+++++++++++++++++++++++++++++++
Jianghai Zhu, Ph.D
CBR Institute for Biomedical Research
Department of Pathology
Harvard Medical School
200 Longwood Ave., Boston, MA 02115
Ph: 617-278-3211
Fx: 618-278-3232
+++++++++++++++++++++++++++++++
On Aug 4, 2007, at 11:31 PM, Pavel Afonine wrote:
> We make sure the default protocols are correct. The correctness of
> user
> customized protocols is user's responsibility to verify; however we
> are
> free to provide some guidance here.
>
> Pavel.
>
>
> Jianghai Zhu wrote:
>> Yes, yes. But before one admits the model with the higher Rfree is
>> the more accurate model, one must make sure the refinement
>> protocol is
>> correct.
>>
>> Jianghai
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