[phenixbb] ls_wunit_k1

[Jianghai Zhu]

The default target for rigid body is LS from "phenix.refine --show- 
defaults=all".  Is this intentional?

Jianghai

+++++++++++++++++++++++++++++++
Jianghai Zhu, Ph.D
CBR Institute for Biomedical Research
Department of Pathology
Harvard Medical School
200 Longwood Ave., Boston, MA 02115
Ph: 617-278-3211
Fx: 618-278-3232
+++++++++++++++++++++++++++++++



On Mar 25, 2007, at 10:14 PM, Jianghai Zhu wrote:

> I checked my log file and didn't find "automatic adjustment".  My  
> main target is mlhl.  However, the target function for rigid body  
> is ls_wunit_k1.  I didn't choose that.  Is LS the default for rigid  
> body?
>
> Jianghai
>
> +++++++++++++++++++++++++++++++
> Jianghai Zhu, Ph.D
> CBR Institute for Biomedical Research
> Department of Pathology
> Harvard Medical School
> 200 Longwood Ave., Boston, MA 02115
> Ph: 617-278-3211
> Fx: 618-278-3232
> +++++++++++++++++++++++++++++++
>
>
>
> On Mar 25, 2007, at 10:00 PM, Ralf W. Grosse-Kunstleve wrote:
>
>>> You are right.  Somehow, the default target function in
>>> refinement.bulk_solvent_and_scale is LS, not ML.
>>
>> The default (phenix.refine --show-defaults=all) is actually ml.
>> However, if the main target is set to ls the bulk_solvent_and_scale
>> target is automatically reset to ls, too. There should be  
>> corresponding
>> messages in the log file ("automatic adjustment").
>> Ralf
>> _______________________________________________
>> phenixbb mailing list
>> phenixbb at phenix-online.org
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>
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