[phenixbb] geometry in phenix.refine

[Jianghai Zhu]

Is it possible that phenix.pdbtools ignored the H atoms when  
calculating the geometry statistics?

Jianghai

On Feb 21, 2008, at 5:16 PM, Pavel Afonine wrote:

> Hi Jianghai,
>
> no reasons for that: they are supposed to be identical and I just
> checked it myself (we use exact same code to report statistics in both
> phenix.pdbtools and in phenix.refine). If it's not the case, please  
> sent
> us the pdb file so we can have a closer look.
>
> Pavel.
>
>> I also noticed that the geometry output by phenix.refine and
>> phenix.pdbtools are different.  What is the reason for that?
>>
>> Jianghai
>>
>
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