[phenixbb] problem compiling phenix 1.3 beta rc3

Melody Lin xtalin2007 at gmail.com
Tue Mar 4 15:44:50 PST 2008


..................
checking for v4.2.2 of CCP4 library

checking for compiled PHENIX components

configuring PHENIX components with optimization

setting up environment

compiling PHENIX components - this might take an hour

compilation of PHENIX components failed

from compile_phenix.log:
Processing: "/usr/local/phenix-1.3b-rc3/docutils/libtbx_refresh.py"
  Processing: "/usr/local/phenix-1.3b-rc3/docutils/tools"
scons: Reading SConscript files ...
RuntimeError: Cannot find a supported Fortran compiler on PATH:
  Supported compilers are: ifort, g77, gfortran
  To resolve this problem update PATH or install a supported
  compiler.:
  File "/usr/local/phenix-1.3b-rc3/build/mac-ppc-osx/SConstruct", line 7:
    SConscript("ccp4lib_422_cci/SConscript")
  File "/usr/local/phenix-1.3b-rc3/scons/src/engine/SCons/Script/SConscript.py",
line 596:
    return apply(method, args, kw)
  File "/usr/local/phenix-1.3b-rc3/scons/src/engine/SCons/Script/SConscript.py",
line 533:
    return apply(_SConscript, [self.fs,] + files, subst_kw)
  File "/usr/local/phenix-1.3b-rc3/scons/src/engine/SCons/Script/SConscript.py",
line 256:
    exec _file_ in call_stack[-1].globals
  File "/usr/local/phenix-1.3b-rc3/ccp4lib_422_cci/SConscript", line 114:
    + "  compiler.")
usr+sys time: 3.10 seconds, ticks: 1127611, micro-seconds/tick: 2.749
wall clock time: 6.86 seconds


thanks

Melody


On Wed, Mar 5, 2008 at 12:37 AM, Peter Zwart <PHZwart at lbl.gov> wrote:

> Can you send the exact message?
>
> P
>
> 2008/3/4, Melody Lin <xtalin2007 at gmail.com>:
> > Dear all,
> >
> > I have a problem compiling phenix-1.3beta-rc3 on my Mac OSX tiger ppc. I
> > downloaded the tar file under the sbgrid directory and issued command
> "sudo
> > ./install" to compile it after unzipping. Everything went OK until the
> last
> > step when the installer is trying to compile phenix components, ands
> says it
> > will take an hour, but in 2 minutes it reports failure for the
> compilation.
> > Could anyone suggest what problem this is? Did I download the wrong tar
> > file?
> >
> > Your input is greatly appreciated!
> >
> > Best,
> > Yan
> >
> > _______________________________________________
> >  phenixbb mailing list
> >  phenixbb at phenix-online.org
> >  http://www.phenix-online.org/mailman/listinfo/phenixbb
> >
> >
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
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>
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