[phenixbb] optimize weights error

Pavel Afonine PAfonine at lbl.gov
Tue Oct 21 13:32:33 PDT 2008


Hi Sean,

please get and install the latest version and most likely this will fix 
the problem:

http://www.phenix-online.org/download/

Please let me know if the problem still exist in the latest version.

Pavel.

On 10/21/2008 1:26 PM, Sean Johnson wrote:
> I just tried optimizing weights in phenix.refine using optimize_wxc=true 
> and optimize_wxu=true in the command line.  I got the following error:
>
>             ----------xray term weight optimization (wxc)----------
>
> Traceback (most recent call last):
>   File 
> "/usr/local/phenix-1.3b-rc5/phenix/phenix/command_line/refine.py", line 
> 5, in <module>
>     command_line.run(command_name="phenix.refine", args=sys.argv[1:])
>   File 
> "/usr/local/phenix-1.3b-rc5/phenix/phenix/refinement/command_line.py", 
> line 82, in run
>     call_back_after_monitor_collect=call_back_after_monitor_collect)
>   File "/usr/local/phenix-1.3b-rc5/phenix/phenix/refinement/driver.py", 
> line 1150, in run
>     call_back_after_monitor_collect = call_back_after_monitor_collect)
>   File 
> "/usr/local/phenix-1.3b-rc5/phenix/phenix/refinement/strategies.py", 
> line 446, in refinement_machine
>     log                           = log)
>   File 
> "/usr/local/phenix-1.3b-rc5/phenix/phenix/refinement/weight_xray_chem.py", 
> line 252, in __init__
>     self.wxc_optimization()
>   File 
> "/usr/local/phenix-1.3b-rc5/phenix/phenix/refinement/weight_xray_chem.py", 
> line 507, in wxc_optimization
>     wxc = self.holder.wxc
> AttributeError: weight instance has no attribute 'holder'
>
>
> Any suggestions?
> Thanks,
> Sean
>
>   



More information about the phenixbb mailing list