[phenixbb] weight optimization
Pavel Afonine
PAfonine at lbl.gov
Tue Oct 28 15:40:48 PDT 2008
Hi Raja,
this bug is fixed in the latest version of PHENIX:
http://www.phenix-online.org/download/
Pavel.
On 10/28/2008 3:32 PM, Raja Dey wrote:
> Hi,
> I was trying to optimize weights as follows, but it came out with the error given below. Can anyone tell me what's wrong?
> I used
> phenix.refine ../p65_nat.mtz ../p65_136.1.pdb optimize_wxc=true optimize_wxu=true output.prefix=136.1
>
>
> ----------xray term weight optimization (wxc)----------
>
> Traceback (most recent call last):
> File "/usr/local/phenix-1.3b-rc6/phenix/phenix/command_line/refine.py", line 5, in <module>
> command_line.run(command_name="phenix.refine", args=sys.argv[1:])
> File "/usr/local/phenix-1.3b-rc6/phenix/phenix/refinement/command_line.py", line 82, in run
> call_back_after_monitor_collect=call_back_after_monitor_collect)
> File "/usr/local/phenix-1.3b-rc6/phenix/phenix/refinement/driver.py", line 1143, in run
> call_back_after_monitor_collect = call_back_after_monitor_collect)
> File "/usr/local/phenix-1.3b-rc6/phenix/phenix/refinement/strategies.py", line 449, in refinement_machine
> log = log)
> File "/usr/local/phenix-1.3b-rc6/phenix/phenix/refinement/weight_xray_chem.py", line 256, in __init__
> self.wxc_optimization()
> File "/usr/local/phenix-1.3b-rc6/phenix/phenix/refinement/weight_xray_chem.py", line 511, in wxc_optimization
> wxc = self.holder.wxc
> AttributeError: weight instance has no attribute 'holder'
>
> Thanks...
> Raja
>
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