[phenixbb] memory error

Anastasia A Aksyuk aaksyuk at bio.purdue.edu
Mon Sep 22 10:57:25 PDT 2008


Thanks,
Is there a way to find how much memory I need?
I am running the job remotely on a machine that has 3.5 gig of memory free.
Thanks once again,
Anastasia

Ralf W. Grosse-Kunstleve wrote:
> Hi Anastasia, sorry, but your jobs will only run on a machine with
> more memory. If your space group has lattice translations (e.g.
> C, I, F, R) you could try to transform the data and the model
> to a primitive setting, but since your job is crashing fairly
> early on I'm not sure how much it will help.
> Reducing phenix.refine's memory footprint is a long term development
> goal.
> Ralf
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