[phenixbb] Error in running Autosol....

[Nathaniel Echols]

On Aug 15, 2009, at 7:51 AM, Thomas C. Terwilliger wrote:
> You can run from the command line in the same place you ran from the  
> GUI
> by saying
>
> phenix.autosol autosol.eff debug=True
>
> because the GUI writes out autosol.eff when it runs, saving your  
> inputs.
> Then you can override those values by putting debug=True on the  
> command
> line.

One small correction to this: the .eff file gets written to a  
different location now (not the current directory).  It will be in the  
directory phenix/project_data/ in whatever the project directory is,  
and it will have a name like "autosol_0.eff".  I only use these  
internally in the GUI; to re-run the project, you should use the file  
autosol.eff in whatever the output directory was, e.g.:

% phenix.autosol AutoSol_run_1_/autosol.eff debug=True

This has the final parameters that AutoSol actually used once it  
started (it figures out some things automatically that the GUI doesn't  
bother with).  If it works this way, there may be something wrong with  
the GUI; I'll check and make sure nothing has broken, but it hasn't  
changed recently (although the next build will have some unrelated  
fixes).

-Nat

--------------------
Nathaniel Echols
Lawrence Berkeley Lab
510-486-5136
NEchols at lbl.gov