[phenixbb] extract sequence from pdb

[Francis E Reyes]

phenix.print_sequence


phenix.* has a lot of good utils I didnt know about until I tab  
completed it.

FR

On Jun 8, 2009, at 9:17 AM, chern wrote:

> Hi everybody,
>
> I am building a model of protein and the sequence has wrong parts. I  
> want to compare it to the original sequence side-by-side. How can I  
> extract a one-letter sequence from the pdb file?  This information  
> should be easily generated by auto build. I mean, I give the pdb and  
> get the fasta format sequence.
>
> Maia
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://www.phenix-online.org/mailman/listinfo/phenixbb

---------------------------------------------
Francis Reyes M.Sc.
215 UCB
University of Colorado at Boulder

gpg --keyserver pgp.mit.edu --recv-keys 67BA8D5D

8AE2 F2F4 90F7 9640 28BC  686F 78FD 6669 67BA 8D5D

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20090608/929f9288/attachment-0003.htm>