[phenixbb] phenix.refine simulated annealing modes
Pavel Afonine
PAfonine at lbl.gov
Mon Jun 29 14:50:34 PDT 2009
Hi Alejandro,
sorry, it's not documented.
In your case use "once" or "first_half", which means the SA will be
performed in a middle of refinement ("once"; at N/2 macro-cycle, where N
is the total number of macro-cycles) or during first N/2 macro-cycles.
Pavel.
On 6/29/09 2:34 PM, Alejandro Buschiazzo wrote:
> Dear Phenix users,
>
> I can't find information on the precise meaning of the different modes
> to perform SA during refinement; some choices are self-explanatory (such
> as "every_macro_cycle" or "second_and_before_last"), but what about
> "once" or "first_half"?
> (in my particular case, I want to perform only one simulated annealing
> routine on the second macro_cycle: can I use "once"? but, where should
> I define at which cycle to perform it?)
>
> Thank you for your help,
>
> Best,
>
>
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