[phenixbb] creating cif for Zn

[mickael blaise]

Hi Raja

I had once this problem  in my case ZN was written instead of Zn and the
refinement was stopping ...

mick



2009/5/26 Raja Dey <rdey at usc.edu>

> Dear Friends,
>                     I have Zn atoms in my pdb file. So, I think I need to
> run elbow to create the cif  otherwise refinement stops.
> I did the following and got the error as follows:
>
> phenix.elbow generate_easy_r4.pdb --do-all
>
>
>
>  ------------------------------------------------------------------------------
>  electronic Ligand Builder & Optimisation Workbench (eLBOW) 1.4 3
>    - Nigel W. Moriarty (NWMoriarty at LBL.Gov)
>
>  ------------------------------------------------------------------------------
>
>  Random number seed:  664322001
>  0:00 Parsing Parsing Parsing Parsing Parsing Parsing Parsing Parsing
> Parsing P
>
>        No molecule read
>
>        Use --all-residues to view residues if this is a PDB file
>
> Can anyone suggests at this point, what I should do?
> Thanking you in advance...
>
> Raja
>
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-- 
------------------------------------------
Mickael Blaise PhD
Department of molecular biology
Centre for structural biology
Aarhus university
Gustav wieds vej 10
8000 Aarhus-Denmark
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