[phenixbb] function to complete sidechains with rotamer

Jeff Headd jjheadd at lbl.gov
Mon Apr 19 13:48:04 PDT 2010


Hi Joel,

No, at present there is no way to do this in PHENIX, but is something
that I've been working on within the last few weeks.  It's on my list
of things to get working in the short term and will hopefully be in
PHENIX sometime soon.

Thanks,
Jeff

On Mon, Apr 19, 2010 at 1:44 PM, Joel Bard <joel.bard at pfizer.com> wrote:
> Hi-
>
> Is there a way in phenix to fill in missing sidechain atoms with the
> least clashing rotamer and set those atoms to zero occupancy?  Modelers
> seem to prefer this to completely leaving out the atoms that aren't
> visible in density.
>
> Thanks,
>
> Joel
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