April 2010 Archives by date
Starting: Thu Apr 1 03:58:04 PDT 2010
Ending: Fri Apr 30 12:37:28 PDT 2010
Messages: 242
- [phenixbb] Refinement with partial model - question
Peter Grey
- [phenixbb] Secondary structure restraints for nucleic acids
Peter Grey
- [phenixbb] Refinement with partial model - question
Pavel Afonine
- [phenixbb] Refinement with partial model - question
Alexandre Urzhumtsev
- [phenixbb] Optimizing the Geometry Weight for a 2.76 A structure
Sam Stampfer
- [phenixbb] Optimizing the Geometry Weight for a 2.76 A structure
Nathaniel Echols
- [phenixbb] Optimizing the Geometry Weight for a 2.76 A structure
Pavel Afonine
- [phenixbb] Optimizing the Geometry Weight for a 2.76 A structure
Pavel Afonine
- [phenixbb] Refinement with partial model - question
Pavel Afonine
- [phenixbb] Restraints on dihedrals in phenix.refine
Gregers Rom Andersen
- [phenixbb] Installation problem
Tatsuya Kaminishi
- [phenixbb] Refinement with partial model - question
Ed Pozharski
- [phenixbb] Restraints on dihedrals in phenix.refine
Pavel Afonine
- [phenixbb] Optimizing the Geometry Weight for a 2.76 A structure
Phil Jeffrey
- [phenixbb] Refinement with partial model - question
Peter Grey
- [phenixbb] Refinement with partial model - question
Pavel Afonine
- [phenixbb] Restraints on dihedrals in phenix.refine
Jeff Headd
- [phenixbb] rfree set
r n
- [phenixbb] Optimizing the Geometry Weight for a 2.76 A structure
det102 at uoxray.uoregon.edu
- [phenixbb] Secondary structure restraints for nucleic acids
Nathaniel Echols
- [phenixbb] Installation problem
Nathaniel Echols
- [phenixbb] Refinement with partial model - question
Pavel Afonine
- [phenixbb] Refinement with partial model - question
Pavel Afonine
- [phenixbb] Secondary structure restraints for nucleic acids
Peter Grey
- [phenixbb] map grid size
Sean Gay
- [phenixbb] Double stranded DNA restraints?
Rajagopalan, Senapathy
- [phenixbb] rfree set
Ralf W. Grosse-Kunstleve
- [phenixbb] Optimizing the Geometry Weight for a 2.76 A structure
Edward A. Berry
- [phenixbb] map grid size
Nathaniel Echols
- [phenixbb] Optimizing the Geometry Weight for a 2.76 A structure
det102 at uoxray.uoregon.edu
- [phenixbb] Optimizing the Geometry Weight for a 2.76 A structure
Edward A. Berry
- [phenixbb] Torsion angels refinement question
Peter Grey
- [phenixbb] (no subject)
Prof Jennifer Martin (IMB)
- [phenixbb] Torsion angels refinement question
Pavel Afonine
- [phenixbb] (no subject)
Ralf W. Grosse-Kunstleve
- [phenixbb] (no subject)
Nigel W Moriarty
- [phenixbb] rfree set
r n
- [phenixbb] PPC binaries?
Marcelo Carlos Sousa
- [phenixbb] PPC binaries?
Nathaniel Echols
- [phenixbb] rfree set
Ralf W. Grosse-Kunstleve
- [phenixbb] Refinement with partial model - question
Ed Pozharski
- [phenixbb] Refinement with partial model - question
Christian Roth
- [phenixbb] Re Double stranded DNA restraints?
Thomas C. Terwilliger
- [phenixbb] polygon and membrane proteins
Pascal Egea
- [phenixbb] polygon and membrane proteins
Pavel Afonine
- [phenixbb] polygon and membrane proteins
Patrick Loll
- [phenixbb] polygon and membrane proteins
Pavel Afonine
- [phenixbb] polygon and membrane proteins
Nathaniel Echols
- [phenixbb] LSTc refinement in phenix.refine
JXQI
- [phenixbb] LSTc refinement in phenix.refine
Nigel W Moriarty
- [phenixbb] OpenMP incompatible with Phenix GUI?
Donnie Berkholz
- [phenixbb] OpenMP incompatible with Phenix GUI?
Nathaniel Echols
- [phenixbb] individual_sites_real_space?
Francis E Reyes
- [phenixbb] individual_sites_real_space?
Pavel Afonine
- [phenixbb] phenixbb posting
Leonid Flaks
- [phenixbb] OpenMP incompatible with Phenix GUI?
Donnie Berkholz
- [phenixbb] fixing atoms
Green, Todd
- [phenixbb] low resolution secondary structure refinement
r n
- [phenixbb] low resolution secondary structure refinement
Pavel Afonine
- [phenixbb] low resolution secondary structure refinement
Nathaniel Echols
- [phenixbb] low resolution secondary structure refinement
Nathaniel Echols
- [phenixbb] low resolution secondary structure refinement
Pavel Afonine
- [phenixbb] low resolution secondary structure refinement
Ralf W. Grosse-Kunstleve
- [phenixbb] fixing atoms
Pavel Afonine
- [phenixbb] Superimposing homologues
Young-Jin Cho
- [phenixbb] Superimposing homologues
Jim Fairman
- [phenixbb] Superimposing homologues
Thomas C. Terwilliger
- [phenixbb] Superimposing homologues
Pavel Afonine
- [phenixbb] Superimposing homologues
Bryan Lepore
- [phenixbb] fixing backbone of selected part during phenix.refine
Raja Dey
- [phenixbb] fixing backbone of selected part during phenix.refine
Pavel Afonine
- [phenixbb] fixing backbone of selected part during phenix.refine -PS
Pavel Afonine
- [phenixbb] applying B_factor and scale correction to an MTZ
Francois Berenger
- [phenixbb] applying B_factor and scale correction to an MTZ
Pavel Afonine
- [phenixbb] applying B_factor and scale correction to an MTZ
Francois Berenger
- [phenixbb] applying B_factor and scale correction to an MTZ
Pavel Afonine
- [phenixbb] Superimposing homologues
Jonathan Elegheert
- [phenixbb] fix rotamers
Robert Ng
- [phenixbb] fix rotamers
Pavel Afonine
- [phenixbb] fixing backbone of selected part during phenix.refine -PS
Raja Dey
- [phenixbb] refinement at 3.7A
vincent Chaptal
- [phenixbb] refinement at 3.7A
Jason C Porta
- [phenixbb] refinement at 3.7A
Christina Bourne
- [phenixbb] refinement at 3.7A
Nathaniel Echols
- [phenixbb] refinement at 3.7A
Pavel Afonine
- [phenixbb] assert n_ncs > 0
Robert Ng
- [phenixbb] assert n_ncs > 0
Ralf W. Grosse-Kunstleve
- [phenixbb] assert n_ncs > 0
Pavel Afonine
- [phenixbb] assert n_ncs > 0
Robert Ng
- [phenixbb] assert n_ncs > 0
Ralf W. Grosse-Kunstleve
- [phenixbb] sculpt program
sbiswas2 at ncsu.edu
- [phenixbb] assert n_ncs > 0
Robert Ng
- [phenixbb] Optimization of the mask parameters in PHENIX
Pascal Egea
- [phenixbb] Optimization of the mask parameters in PHENIX
Nathaniel Echols
- [phenixbb] Optimization of the mask parameters in PHENIX
Pavel Afonine
- [phenixbb] assert n_ncs > 0
Ralf W. Grosse-Kunstleve
- [phenixbb] sculpt program
Dr G. Bunkoczi
- [phenixbb] SAD Phasing
Rajagopalan, Senapathy
- [phenixbb] SAD Phasing
Francis E Reyes
- [phenixbb] SAD Phasing
Rajagopalan, Senapathy
- [phenixbb] Group ADP syntax question
Peter Grey
- [phenixbb] Group ADP syntax question
Pavel Afonine
- [phenixbb] SAD Phasing
Francis E Reyes
- [phenixbb] xtriage and anomalous difference assessment
Francis E Reyes
- [phenixbb] xtriage and anomalous difference assessment
Peter Zwart
- [phenixbb] Autobuild
sbiswas2 at ncsu.edu
- [phenixbb] Phenix.reflection_file_converter enhancement request
Schubert, Carsten [PRDUS]
- [phenixbb] Phenix.reflection_file_converter enhancement request
Ralf W. Grosse-Kunstleve
- [phenixbb] Phenix.reflection_file_converter enhancement request
Nathaniel Echols
- [phenixbb] Phenix.refine bonds/angles rmsd
guanrj at foxmail.com
- [phenixbb] Phenix.refine bonds/angles rmsd
Pavel Afonine
- [phenixbb] Autobuild
Thomas C. Terwilliger
- [phenixbb] completing the description of a residue according to idealized geometry
Peter Grey
- [phenixbb] completing the description of a residue according to idealized geometry
Randy Read
- [phenixbb] Phenix.reflection_file_converter enhancement request
Schubert, Carsten [PRDUS]
- [phenixbb] Phenix.reflection_file_converter enhancement request
Nathaniel Echols
- [phenixbb] Phenix.refine bonds/angles rmsd
guanrj at foxmail.com
- [phenixbb] completing the description of a residue according to idealized geometry
Peter Grey
- [phenixbb] completing the description of a residue according to idealized geometry
Randy Read
- [phenixbb] completing the description of a residue according to idealized geometry
Nigel W Moriarty
- [phenixbb] Phenix.refine bonds/angles rmsd
Pavel Afonine
- [phenixbb] Phenix.refine bonds/angles rmsd
guanrj at foxmail.com
- [phenixbb] Real Space Refinement with marginal data
Schubert, Carsten [PRDUS]
- [phenixbb] Real Space Refinement with marginal data
Pavel Afonine
- [phenixbb] Real Space Refinement with marginal data
Rongjin
- [phenixbb] Phenix.refine bonds/angles rmsd
Jason C Porta
- [phenixbb] Real Space Refinement with marginal data
Pavel Afonine
- [phenixbb] Phenix.refine bonds/angles rmsd
Pavel Afonine
- [phenixbb] Autobuild with ligand in place?
Claudia Scotti
- [phenixbb] completing the description of a residue according to idealized geometry
Peter Grey
- [phenixbb] Autobuild with ligand in place?
Nathaniel Echols
- [phenixbb] Gordon Research Conference on Diffraction Methods
A Leslie
- [phenixbb] structures with problem loops / ligands
Pavel Afonine
- [phenixbb] structures with problem loops / ligands
Kendall Nettles
- [phenixbb] Fix rotamers
Jason C Porta
- [phenixbb] Fix rotamers
Jeff Headd
- [phenixbb] Fix rotamers
Pavel Afonine
- [phenixbb] Fix rotamers
Jason C Porta
- [phenixbb] MTZ files
Kyle Dolan
- [phenixbb] MTZ files
sbiswas2 at ncsu.edu
- [phenixbb] MTZ files
Thomas C. Terwilliger
- [phenixbb] Defining planarity for Phenix.refine
Peter Grey
- [phenixbb] Defining planarity for Phenix.refine
Francis E Reyes
- [phenixbb] Defining planarity for Phenix.refine
Peter Grey
- [phenixbb] Defining planarity for Phenix.refine
Alan Cheung
- [phenixbb] Defining planarity for Phenix.refine
Engin Özkan
- [phenixbb] Defining planarity for Phenix.refine
Nathaniel Echols
- [phenixbb] Defining planarity for Phenix.refine
Francis E Reyes
- [phenixbb] function to complete sidechains with rotamer
Joel Bard
- [phenixbb] function to complete sidechains with rotamer
Jeff Headd
- [phenixbb] Defining planarity for Phenix.refine
Nathaniel Echols
- [phenixbb] Defining planarity for Phenix.refine
Francis E Reyes
- [phenixbb] Defining planarity for Phenix.refine
Jeff Headd
- [phenixbb] histo-blood group antigens
Hansman, Grant (NIH/VRC) [F]
- [phenixbb] histo-blood group antigens
Edward A. Berry
- [phenixbb] histo-blood group antigens
Engin Ozkan
- [phenixbb] Phaser and normal mode analysis
Francois Berenger
- [phenixbb] Phaser and normal mode analysis
Randy Read
- [phenixbb] can phenix.refine create a diff of the current input file with the pdb from the last run before refining?
Francis E Reyes
- [phenixbb] can phenix.refine create a diff of the current input file with the pdb from the last run before refining?
Pavel Afonine
- [phenixbb] can phenix.refine create a diff of the current input file with the pdb from the last run before refining?
Francis E Reyes
- [phenixbb] can phenix.refine create a diff of the current input file with the pdb from the last run before refining?
Ralf W. Grosse-Kunstleve
- [phenixbb] can phenix.refine create a diff of the current input file with the pdb from the last run before refining?
Francis E Reyes
- [phenixbb] model vs Wilson b-factor
Gino Cingolani
- [phenixbb] model vs Wilson b-factor
Pavel Afonine
- [phenixbb] model vs Wilson b-factor
Raja Dey
- [phenixbb] model vs Wilson b-factor
sbiswas2 at ncsu.edu
- [phenixbb] model vs Wilson b-factor
Raja Dey
- [phenixbb] model vs Wilson b-factor
Paul Adams
- [phenixbb] model vs Wilson b-factor
Engin Ozkan
- [phenixbb] model vs Wilson b-factor
Pavel Afonine
- [phenixbb] Phenix.refine in WinXP?
Dima Klenchin
- [phenixbb] Phenix.refine in WinXP?
Nathaniel Echols
- [phenixbb] model vs Wilson b-factor
Engin Ozkan
- [phenixbb] Phenix.refine in WinXP?
Dima Klenchin
- [phenixbb] Phenix.refine in WinXP?
Ralf W. Grosse-Kunstleve
- [phenixbb] model vs Wilson b-factor
MARTYN SYMMONS
- [phenixbb] Phenix.refine in WinXP? - set path automatically?
Edward A. Berry
- [phenixbb] Phenix.refine in WinXP?
Stephen Graham
- [phenixbb] Error in the end of phenix-refine with NCS
José Trincão
- [phenixbb] Phenix.refine in WinXP?
Nathaniel Echols
- [phenixbb] negative density for heavy atom?
Kelly Daughtry
- [phenixbb] negative density for heavy atom?
Pavel Afonine
- [phenixbb] Phaser question : MR+SAD after refinement
Peter Grey
- [phenixbb] Error in the end of phenix-refine with NCS
Pavel Afonine
- [phenixbb] Phaser question : MR+SAD after refinement
Francis E Reyes
- [phenixbb] Error in the end of phenix-refine with NCS
José Trincão
- [phenixbb] negative density for heavy atom?
Nigel W Moriarty
- [phenixbb] Error in the end of phenix-refine with NCS
Nathaniel Echols
- [phenixbb] Phaser question : MR+SAD after refinement
Randy Read
- [phenixbb] model vs Wilson b-factor
Dale Tronrud
- [phenixbb] can phenix.refine create a diff of the current input file with the pdb from the last run before refining?
Scott Classen
- [phenixbb] negative density for heavy atom?
Kelly Daughtry
- [phenixbb] negative density for heavy atom?
Pavel Afonine
- [phenixbb] negative density for heavy atom?
Sue Roberts
- [phenixbb] can phenix.refine create a diff of the current inputfile with the pdb from the last run before refining?
Schubert, Carsten [PRDUS]
- [phenixbb] can phenix.refine create a diff of the current inputfile with the pdb from the last run before refining?
Ralf W. Grosse-Kunstleve
- [phenixbb] Improved refinement method for low resolution data
Florian Nachon
- [phenixbb] Improved refinement method for low resolution data
Jeff Headd
- [phenixbb] Improved refinement method for low resolution data
Pavel Afonine
- [phenixbb] apply_cif_link
Hansman, Grant (NIH/VRC) [F]
- [phenixbb] apply_cif_link
Nigel W Moriarty
- [phenixbb] apply_cif_link
Nigel W Moriarty
- [phenixbb] Conflicting scattering type symbols: refine with TaBr
Francis E Reyes
- [phenixbb] Conflicting scattering type symbols: refine with TaBr
Nathaniel Echols
- [phenixbb] apply_cif_link
Engin Ozkan
- [phenixbb] Phenix Ligand Identification error
Rajan
- [phenixbb] Phenix Ligand Identification error
Nathaniel Echols
- [phenixbb] how to generate sharpened map for input into Pymol
Daqi Tu
- [phenixbb] how to generate sharpened map for input into Pymol
Nathaniel Echols
- [phenixbb] Phenix Ligand Identification error
Li-Wei Hung
- [phenixbb] how to generate sharpened map for input into Pymol
Daqi Tu
- [phenixbb] how to generate sharpened map for input into Pymol
Pavel Afonine
- [phenixbb] ReadySet for special position metal
TC Hu
- [phenixbb] ReadySet for special position metal
Ralf W. Grosse-Kunstleve
- [phenixbb] B factor for DNA and Protein
Raja Dey
- [phenixbb] B factor for DNA and Protein
Pavel Afonine
- [phenixbb] Follow up question: Re: B factor for DNA and Protein
Young-Jin Cho
- [phenixbb] phenix.elbow
r n
- [phenixbb] phenix.elbow
Nigel W Moriarty
- [phenixbb] How do I make trisaccharide, tetrasaccharides
Hansman, Grant (NIH/VRC) [F]
- [phenixbb] Follow up question: Re: B factor for DNA and Protein
Pavel Afonine
- [phenixbb] How do I make trisaccharide, tetrasaccharides
Pavel Afonine
- [phenixbb] How do I make trisaccharide, tetrasaccharides
Pavel Afonine
- [phenixbb] AutoBuild error message prime and switch
Rebecca Oot
- [phenixbb] AutoBuild error message prime and switch
Tom Terwilliger
- [phenixbb] How do I make trisaccharide, tetrasaccharides
Nigel W Moriarty
- [phenixbb] NCS problems using phenix GUI on a Mac
John Pascal
- [phenixbb] NCS problems using phenix GUI on a Mac
Nathaniel Echols
- [phenixbb] Rigid body refinement question
Simon Kolstoe
- [phenixbb] Rigid body refinement question
Ralf W. Grosse-Kunstleve
- [phenixbb] Rigid body refinement question
Ralf W. Grosse-Kunstleve
- [phenixbb] Rigid body refinement question
Young-Jin Cho
- [phenixbb] Rigid body refinement question
Ralf W. Grosse-Kunstleve
- [phenixbb] Rigid body refinement question
Pavel Afonine
- [phenixbb] Rigid body refinement question
Pavel Afonine
- [phenixbb] Rigid body refinement question
Pavel Afonine
- [phenixbb] nucleic acid nomencalture
riya doreen
- [phenixbb] nucleic acid nomencalture
Ralf W. Grosse-Kunstleve
- [phenixbb] nucleic acid nomencalture
Nathaniel Echols
- [phenixbb] nucleic acid nomencalture
Francis E Reyes
- [phenixbb] Error in PDB Validation letter
Raja Dey
Last message date:
Fri Apr 30 12:37:28 PDT 2010
Archived on: Thu Mar 31 11:13:59 PDT 2011
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