[phenixbb] AUTOSOL for MAD data with error message-'Need a symfile for solve'

[Peter Czabotar]

Hi Tom, I have managed to solve the problem, as indicated by the error
message there was no sym file present in;

/phenix-1.6.1-357/solve_resolve/ext_ref_files

To get around this I have just created the required sym file myself and
placed it in the directory. I am surprised we have the problem though if
it was fixed before phenix 1.6.1. Is there a source to download individual
.sym files, I could not find any on the phenix website nor in a cursory
google search.

Cheers
Peter


> Hi Peter,
> I am a little puzzled...I would have thought that it was fixed in phenix
> 1.6.1. Can you possibly send me your data and exact command so that I can
> fix this?  I'm sorry about that!
> -Tom T
>
>>> I am also having this problem, has this been corrected? I am using
> phenix-1.6.1 through the phenix GUI.
>>>
>>> Cheers
>>> Peter Czabotar
>>>
>>>
>>>>Hi again Frank and Graeme and Mohan,
>>>>
>>>>This is now fixed and should be available in tomorrow's build of
> PHENIX. Most setting should now be available in Autosol (this bug only
> affected Autosol, not Autobuild or any other PHENIX routines).
>>>>
>>>>Thanks for pointing out the problem (and Mohan if this does not solve
> it in your case, please let me know and I'll continue to fix it).
>>>>
>>>>All the best,
>>>>Tom T
>>>>
>>>>> Hi Frank and Graeme and Mohan,
>>>>>
>>>>> Yes, P 2 21 21 should be allowed in autosol. I see that it doesn't
> work and I'll fix that.
>>>>>
>>>>> All the best,
>>>>> Tom T
>>>>>
>>>>>
>>>>>>> Um, this one has been hacked to death on ccp4bb:  there is in fact
> nothing wrong or "non-standard" with that setting.  If the program
> won't
>>>>>>> handle it, email the authors and ask them to fix it.
>>>>>>>
>>>>>>> Reindexing is an almighty pain in the butt.
>>>>>>>
>>>>>>> That said:  it sounds like you may be pointing at an out-of-date
> symmetry operator file;  I forget which environment variable it is,
> check the manual, but point it to an up-to-date ccp4 installation,
> and
>>>>>>> I
>>>>>>> suspect it will be fine.
>>>>>>>
>>>>>>> phx
>>>
>>>
>>>
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