[phenixbb] how to cut off side chain from a model
Nathaniel Echols
nechols at lbl.gov
Mon Feb 14 10:52:55 PST 2011
n Mon, Feb 14, 2011 at 9:53 AM, Edward A. Berry <BerryE at upstate.edu> wrote:
> This seems very flexible and general indeed, but for the specific
> job of making an MR model, it could be very tedious to code which
> atoms to keep for which residues, where to delete, and how to renumber.
> Chainsaw does all of that for you.
FYI, phenix.sculptor is the Phenix tool for this. I do not know what
the exact overlap in function with Chainsaw is, but it is also based
on sequence alignment.
http://www.phenix-online.org/documentation/sculptor.htm
-Nat
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