[phenixbb] bugs in dev 625

Weiergräber, Oliver H. o.h.weiergraeber at fz-juelich.de
Tue Jan 4 05:08:51 PST 2011


Hello,

trying to use phenix.autobuild (command line version, didn't try the gui) in dev 625, I encountered the following error:

############################################
Build cycle 1 of 6   method:rebuild
Initial rebuild cycle: just combining previous models or copying
over initial PDB file

Using edited_pdb.pdb for rebuild, copied to unrefined.pdb_1
Refining model:  unrefined.pdb_1
No refinement carried out (may need free R flags)
Error message from phenix.refine:  global name 'libtbx' is not defined
Refinement failed...
############################################

If invoked directly, phenix.refine seems to run fine, so there may be a problem with scripting in the autobuild wizard.

Regards,
Oliver


================================================
 PD Dr. Oliver H. Weiergräber
 Institut für Strukturbiologie und Biophysik
 ISB-3: Strukturbiochemie
 Tel.: +49 2461 61-2028
 Fax: +49 2461 61-1448
================================================

------------------------------------------------------------------------------------------------
------------------------------------------------------------------------------------------------
Forschungszentrum Juelich GmbH
52425 Juelich
Sitz der Gesellschaft: Juelich
Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498
Vorsitzender des Aufsichtsrats: MinDirig Dr. Karl Eugen Huthmacher
Geschaeftsfuehrung: Prof. Dr. Achim Bachem (Vorsitzender),
Dr. Ulrich Krafft (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt,
Prof. Dr. Sebastian M. Schmidt
------------------------------------------------------------------------------------------------
------------------------------------------------------------------------------------------------



More information about the phenixbb mailing list