[phenixbb] phenix.mr_rosetta paths
Ben Eisenbraun
bene at hkl.hms.harvard.edu
Mon Jan 31 12:47:07 PST 2011
Hi Tom,
> All you should need is the...
Great. Thanks.
> Note: it may be helpful to run one or more of the regression tests on
> this to make sure you have everything set up correctly. You can do this
> for example with one of these:
>
> phenix_regression.wizards.test_command_line_rosetta test_mr_rosetta # one full test, takes 15 minutes
I saw the note about the regression test in the docs a few minutes after I
sent the last email, and it passed the default 7 tests without issue.
(As an side, the whole list of phenix_regression.foo tools looks kind of
exciting. That tells you something about my personality I guess. I'm not
sure what. :-)
The docs here need a little attention:
http://www.phenix-online.org/documentation/mr_rosetta.htm
Some of the blocks of code lead with an incorrect:
phenix.mr_rosetta exptl_fobs_phases_freeR_flags.mtz sequence.dat
And Rosetta 3.2 is out now, so that part can be updated.
Thanks.
-ben
--
| Ben Eisenbraun
| SBGrid Consortium | http://sbgrid.org |
| Harvard Medical School | http://hms.harvard.edu |
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