[phenixbb] Geometry Restraints

[Nathaniel Echols]

On Thu, Apr 19, 2012 at 8:00 AM, Mario Sanches <mariosan at gmail.com> wrote:
> I see regions with bad clashes solely because during refinement a side chain
> is being fit into a density peak that is to close to another residue atoms.
> I wonder if there is a way to tell the program to avoid clashes even if it
> is at the expense of real-space fitting?

Are you using the automatic rotamer correction?  This performs poorly
at low resolution - 2.9A is about the point where it really breaks
down.

-Nat