[phenixbb] OFFLIST dev-1227: problem reading in tls parameters from refmac or tlsmd
nechols at lbl.gov
Sun Dec 2 08:20:27 PST 2012
I think there may be some confusion about the format of the files:
TLSMD generates a phenix.refine parameter file which is in the syntax
we need, e.g.:
tls = "chain A and resseq 1:10"
tls = "chain B and resseq 11:20"
I suspect the files Boaz is trying to use are the ones in Refmac
syntax, which we do not read. Boaz, could you please send me the
files off-list so I can confirm?
On Sun, Dec 2, 2012 at 7:14 AM, vellieux <frederic.vellieux at ibs.fr> wrote:
> Hi Boaz,
> Try renaming your .tlsin file as a .txt file and read it (you have to chose
> a "txt" file in the pull down menu). This is the way I do it with files
> generated from the TLSMD server and it has never failed so far !
> On 02/12/12 15:16, Boaz Shaanan wrote:
>> In the TLS pulldown I tried to upload tls parameters from either refmac
>> (.tls) or tlsmd (.tlsin) through the 'load' button, according to the
>> suggestion in this section, but it complains about wrong format of the file.
>> Am I doing something wrong?
>> Boaz Shaanan, Ph.D.
>> Dept. of Life Sciences
>> Ben-Gurion University of the Negev
>> Beer-Sheva 84105
>> E-mail: bshaanan at bgu.ac.il
>> Phone: 972-8-647-2220 Skype: boaz.shaanan
>> Fax: 972-8-647-2992 or 972-8-646-1710
>> phenixbb mailing list
>> phenixbb at phenix-online.org
> Fred. Vellieux (B.Sc., Ph.D., hdr)
> IBS / ELMA
> 41 rue Jules Horowitz
> F-38027 Grenoble Cedex 01
> Tel: +33 438789605
> Fax: +33 438785494
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