[phenixbb] Refinement and glycosylation.

Jan van Agthoven janccp4 at gmail.com
Mon Dec 10 07:41:57 PST 2012


Hi everyone,
I refined my structure using phenix.refine and used the following
parameters to define the ASN-NAG link:
refinement.pdb_interpretation.apply_cif_link {
  data_link = NAG-ASN
  residue_selection_1 = chain A and resname NAG and resseq  x
  residue_selection_2 = chain A and resname ASN and resseq   y
}

However I would like the glycosylation to be Beta (NAG in Beta configuration).
How can I define this in the parameter file?
Thanks,


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