[phenixbb] Phenix cut out density labels choice
gort105 at gmail.com
Thu Sep 20 03:04:28 PDT 2012
I have a following issue with running Phenix.cutout density either on
command line or in GUI.
I have multiple columns in the mtz.file and I want to choose map
coefficients FOFCWT_d1-8,PHFOFCWT_d1-8 for the difference map to be cut
around pdb selection. I run a command:
phenix.cut_out_density model.pdb my.mtz
cutout_fix_position=True cutout_model_radius=10 cutout_type=model
Problem: The output cutout.mtz has FWT and PHWT (which I did not have at
all in the input) and not my difference map coefficients, and obviously the
map is not my difference map.
In GUI is the same problem, I choose columns I need but it outputs FWT and
Please, let me know what I am doing wrong.
Thank you very much!
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