[phenixbb] Problem rebuilding ligand structure

[Bishwa Subedi]

Hi Nat,

Yes, I did that.

Best regards,

Bishwa 




On Jan 11, 2013, at 6:08 PM, Nathaniel Echols wrote:

> On Fri, Jan 11, 2013 at 2:07 AM,  <bsubedi at btk.fi> wrote:
>> I used readyset to obtain the restrains for refinement using .pdb file, even
>> though my refinement works, when i try to run real build refine in coot I get
>> this error message:
>> 
>> Failed to match (to the dictionary) the following model atom names:
>> HB3
>> “O6” “C10” “C11” “C12” “O7” “C13” “O5” “C8” “C9” ......
>> That would cause exploding atoms, so the refinement didn't start.
>> 
>> Could someone help me with fixing this problem.
> 
> Did you load the CIF from ready_set into Coot first?  (File menu ->
> Import CIF dictionary)
> 
> -Nat
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://phenix-online.org/mailman/listinfo/phenixbb

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20130111/aafd5e8b/attachment.htm>