[phenixbb] Option for renumber the pdb

Nathaniel Echols nechols at lbl.gov
Wed Feb 26 23:23:30 PST 2014


I don't think pdbtools has this right now, although it can probably be
added with minimal effort.  If you're willing and able to edit your model
interactively, phenix.pdb_editor is much more flexible (but it's a GUI, so
not suitable for automated use).

Of course I'm pretty sure Coot can do this too.

-Nat


On Wed, Feb 26, 2014 at 9:21 PM, Rojan Shrestha <rojan at riken.jp> wrote:

> Hello,
>
> I have found the program phenix.pdbtools. Maybe, it can renumber residues
> of pdb. I have found the options *renumber_residues* options but I am
> unable to see the options for starting residues.
>
> I have pdb starts from 1 and want to renumber 1 into 250. Can somebody
> tell me how to put the option for starting residue?
>
> Regards,
>
> Rojan
>
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