[phenixbb] Maximum-likelihood score calculation

Nathaniel Echols nechols at lbl.gov
Fri Jul 11 16:25:44 PDT 2014


On Fri, Jul 11, 2014 at 4:17 PM, Jouko Virtanen <jouko at umich.edu> wrote:

> When I use phenix.python score.py file.pdb file.mtz (not the actual file
> paths) I get the following error message
>
> AttributeError: 'module' object has no attribute 'load_model_and_data'
>

This means you're using an outdated version of Phenix; you will need at
least version 1.9 to run the script.  But to repeat, this code snippet is
*not* directly comparable to the scores output by Phaser; phenix.refine
uses a completely different likelihood target.

-Nat
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