[phenixbb] SFALL in CCP4 and calculate F(model) in Phenix

[Pavel Afonine]

Hi Patric,

I don't know what SFALL does. But from the context of your previous 
questions I figure may be this is relevant:

1) phenix.reciprocal_space_arrays:
http://phenix-online.org/version_docs/dev-1750/reference/reciprocal_space_arrays.html

2) phenix.maps:
http://phenix-online.org/version_docs/dev-1750/reference/phenix_maps.html

3) phenix.fmodel:
http://phenix-online.org/version_docs/dev-1750/reference/fmodel.html

4) phenix.refine output includes most of what 1-3) generate.

Pavel


On 7/23/14, 4:06 PM, PC wrote:
> Hi Pavel,
>
> Thank you, just out of curiosity is there a phenix equivalent of SFALL?
>
> Patrick
>
>> -----Original Message-----
>> From: pafonine at lbl.gov
>> Sent: Mon, 21 Jul 2014 16:55:03 -0700
>> To: patrick.cossins at inbox.com, phenixbb at phenix-online.org
>> Subject: Re: [phenixbb] SFALL in CCP4 and calculate F(model) in Phenix
>>
>> Hi Patrick,
>>
>>> I was wondering if SFALL in CCP4 and calculate F(model) for a protein
>>> will give the same MTZ
>>> for a given protein?
>> it is unlikely that whatever SFALL calls Fmodel will be the same as
>> Fmodel calculated by a Phenix tool. In Phenix Fmodel is defined as
>> stated in this paper:
>>
>> http://journals.iucr.org/d/issues/2013/04/00/dz5273/dz5273.pdf
>>
>> Pavel
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