[phenixbb] coot -> fetch pdb & map using EDS

Murpholino Peligro murpholinox at gmail.com
Tue Jun 17 08:47:21 PDT 2014


Is just that a paper used this pdb to do a comparison between this human
lysozyme vs a double mutant human lysozyme, and I just wanted to see
structures and maps for both of them.....just checking..



2014-06-17 10:36 GMT-05:00 Nathaniel Echols <nechols at lbl.gov>:

> On Tue, Jun 17, 2014 at 8:31 AM, Murpholino Peligro <murpholinox at gmail.com
> > wrote:
>
>> fmp at eva02:~$ phenix.fetch_pdb --maps 1JWR
>> Model saved to /home/fmp/1JWR.pdb
>> Sequence saved to /home/fmp/1JWR.fa
>> Sorry: Couldn't download structure factors for 1jwr.
>>
>> It is because the structure factors are not available in the PDB. So this
>> means that there is no way to get them...right? (well...maybe I could
>> contact the authors...but the structure is more than ten  years old...)
>>
>
> You could try, but honestly I think it would be easier to find another
> human lysozyme structure that does have structure factors - there does not
> appear to be a shortage in the PDB.
>
> -Nat
>
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