[phenixbb] phenix rosetta refine
docandreas at gmail.com
Wed Nov 26 08:18:28 PST 2014
I'm trying to get phenix.rosetta_refine to run. I think it's all set up
properly, with Rosetta 3.5 and Phenix 1810 on RHEL 6.3 64bit.
phenix.rosetta_refine model.pdb data.mtz nproc=48 protocol=full > log&
fails with the following error in log:
End of input processing
Sorry: The RosettaScripts executable could not be located. Please add
the appropriate directory to your PATH environment variable, or set the
variable ROSETTA_BIN to point to it.
To me it seems things are defined correctly:
andreas at csbstereo in phenix: echo $ROSETTA_BIN
andreas at csbstereo in phenix: ls $ROSETTA_BIN | grep scripts
andreas at csbstereo in phenix: ll $ROSETTA_BIN/rosetta_scripts.linuxgccrelease
lrwxrwxrwx 1 csbadmin csb 93 Oct 9 2013
Any idea of what's wrong would be greatly appreciated.
X-ray Crystallography Facility Manager
Centre for Structural Biology
Imperial College London
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