[phenixbb] problem reading FEM into coot

Pavel Afonine pafonine at lbl.gov
Sun Sep 7 12:51:21 PDT 2014


Hi John,

it does not open via Auto Open MTZ.

start Coot then

File -> Open MTZ, mmCIF, fcf or phs -> the choose FEM,PHIFEM (there are 
two Fourier maps in this file : FEM and usual 2mFo-DFc).

Pavel

On 9/7/14 11:14 AM, Tanner, John J. wrote:
> Has anyone had problems reading feature enhanced map mtz files into 
> coot?  I made an FEM on a linux computer with phenix.fem, which 
> created an mtz file:
>
> -rw-r--r-- 1 tannerjj tanner 10760960 Sep  7 12:21 fem.mtz
>
> As you can see, the mtz file is not empty.  The fem job appeared to 
> have ended normally, since the last line in the out file is
>
> FEM loop: done so far: 100%Time: 3112.3967
>
> However, when I read this mtz into coot, the map does not appear. 
>  There is no error message from coot. I tried autoinput mtz and read 
> mtz.  I'm using coot on a mac.   I have not tested with coot on Linux.
>
> Thanks.
>
> Jack Tanner
>
>
>
>
> John J. Tanner, PhD
> Professor of Biochemistry and Director of Graduate Admissions and 
> Recruitment
> Professor of Chemistry (Joint Appointment)
> University of Missouri-Columbia
> 125 Chemistry Building
> Columbia, MO  65211
> email: tannerjj at missouri.edu <mailto:tannerjj at missouri.edu>
> phone: 573-884-1280
> fax: 573-882-2754
> http://faculty.missouri.edu/~tannerjj/tannergroup/tanner.html 
> <http://faculty.missouri.edu/%7Etannerjj/tannergroup/tanner.html>
>
>
>
>
>
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://phenix-online.org/mailman/listinfo/phenixbb

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20140907/fff67439/attachment.htm>


More information about the phenixbb mailing list