[phenixbb] Rosetta refinement and MR_Rosetta
miyatake
miyatake at riken.jp
Sat Jan 3 20:17:32 PST 2015
Dear Tom,
Thank you for your reply.
When I execute the command line,
rosetta.build_phenix_interface nproc=8
I see the error message below;
Traceback (most recent call last):
File "/Applications/Phenix-dev-1894/Contents/phenix-dev-1894/build/../modules/phenix/phenix/command_line/rosetta_build_phenix_interface.py", line 106, in <module>
run(sys.argv[1:])
File "/Applications/Phenix-dev-1894/Contents/phenix-dev-1894/build/../modules/phenix/phenix/command_line/rosetta_build_phenix_interface.py", line 49, in run
or set environment variable PHENIX_ROSETTA_PATH.""")
RuntimeError: Path to Rosetta not found. Please specify rosetta_path=PATH on command line,
or set environment variable PHENIX_ROSETTA_PATH.
Why did it happen?
Best regards,
H. Miyatake
On Sat, 3 Jan 2015 17:29:58 +0000
"Terwilliger, Thomas Charles" <terwilliger at lanl.gov> wrote:
> Hi Miyatake,
>
> Can you possibly make sure that you have 2 installations of Rosetta, one for mr_rosetta and one separately configured for rosetta_refine...The second one you set up with:
>
> rosetta.build_phenix_interface
>
> You can see the full instructions for this at:
>
> http://www.phenix-online.org/documentation/reference/rosetta_refine.html#installation
>
> Let me know if that doesn't do it!
> All the best,
> Tom T
>
> ________________________________________
> From: phenixbb-bounces at phenix-online.org [phenixbb-bounces at phenix-online.org] on behalf of miyatake [miyatake at riken.jp]
> Sent: Saturday, January 03, 2015 7:34 AM
> To: phenixbb at phenix-online.org
> Subject: [phenixbb] Rosetta refinement and MR_Rosetta
>
> Dear Phenix users,
>
> Hello,
>
> I run MR_Rosetta without any problems.
>
> When I run, however, Rosetta refinement, it stopped with
> a message "can't find rosetta_bin".
>
> Why did it happen?
>
> H. Miyatake
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> phenixbb at phenix-online.org
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