[phenixbb] Bug in phenix.carbo_load in latest nightlies

[Nigel Moriarty]

Roger

I'll fix this ASAP. In the meantime, please use a version that works.

Cheers

Nigel

---
Nigel W. Moriarty
Building 64R0246B, Physical Biosciences Division
Lawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709     Email : NWMoriarty at LBL.gov
Fax   : 510-486-5909       Web  : CCI.LBL.gov

On Tue, Jan 20, 2015 at 3:58 AM, Roger Dodd <roger.dodd at gmail.com> wrote:

> Hi all,
>
> I've been using the carbo_load tool to add in GlcNAc residues to Asn side
> chains and have noticed that in recent nightlies there is a bug that throws
> up the following error message (this occurs even if carbo_load is just run
> in "mode 1"):
>
> Traceback (most recent call last):
>   File
> "/Applications/phenix-dev-1924/build/../modules/elbow/elbow/command_line/carbo_load.py",
> line 705, in <module>
>     run(args)
>   File
> "/Applications/phenix-dev-1924/build/../modules/elbow/elbow/command_line/carbo_load.py",
> line 417, in run
>     from elbow.saccharide import carbohydrate_classes
>   File
> "/Applications/phenix-dev-1924/modules/elbow/elbow/saccharide/carbohydrate_classes.py",
> line 28, in <module>
>     from phenix.ligands.DensityBlobsClassConnectivity import
> DensityBlobsClassConnectivity
> ImportError: No module named DensityBlobsClassConnectivity
>
> I get this with dev-1894 and dev-1924 but not the last stable 1.9-1692.
>
> Cheers,
>
> Roger
>
> --
> Roger B. Dodd, PhD
> Cambridge Institute for Medical Research
> University of Cambridge School of Clinical Medicine
> Wellcome Trust/MRC Building
> Cambridge Biomedical Campus
> Hills Road
> Cambridge
> CB2 0XY
>
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>
>
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