[phenixbb] phenix.superpose_ligands

Pavel Afonine pafonine at lbl.gov
Thu Jul 16 06:44:24 PDT 2015


Hi Cedric,

> I would like to superimpose a small organic compound (file format sdf) 
> on a small peptide (file format pdb).
>
> Is there a way to use phenix.superpose_ligands to this ?

Have you tried phenix.superpose_ligands? Did it work?
Also, phenix.superpose_pds should do it.

Pavel




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