[phenixbb] ERRASER Updates
calebgeniesse at gmail.com
Wed Nov 4 09:10:31 PST 2015
My name is Caleb and I am a research programmer in the Das lab who has
taken over the maintenance of ERRASER.
ERRASER (Enumerative Real-space Refinment ASsisted by Electron-density
under Rosetta) is an application for improving RNA crystal structures based
on Rosetta and Phenix.
While benchmarking the current state of ERRASER, I uncovered some
discrepancies in the clash scores and outliers of the resulting models
(compared to the original benchmark in Chou FC et al., 2012). Accordingly,
I've made some updates to the ERRASER code within Rosetta addressing these
*To avoid possible inaccuracies introduced by these bugs,* *all
PHENIX-ERRASER users should download/install a weekly build of Rosetta
2015.35 (released Sept. 24, 2015) or later.*
For more extensive PHENIX-ERRASER documentation and installation notes,
Please let me know if you have any questions!
All the best,
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