[phenixbb] Queueing system commands for parallel Phenix/Rosetta jobs

Yonglin Hu yonglinhu at gmail.com
Tue Oct 20 19:46:13 PDT 2015


Hello All,

We have setup a cluster with several executing nodes and we would like to
run our Phenix/Rosetta molecular replacement jobs on the cluster. In the
Job Control screen, I put "qsub -q all.q -o  $HOME/log1 -e $HOME/log1" as
command to use to run multiple jobs.  But I am not sure what I should use
for "queueing system commands".

We are using SGE as the queueing system on  our cluster.

Any help would be greatly appreciated!

Yonglin Hu
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