[phenixbb] CaBLAM validate - alternative output?

Oliver Clarke olibclarke at gmail.com
Wed Oct 28 10:06:14 PDT 2015

Hi all,

I really like the idea of CaBLAM validate for model validation at low resolution based on the CA and backbone geometry, but the output is a little limiting - either text or kinemage right now. Would it be possible to create an output format that can easily be visualized (and turned into figures) in chimera, pymol or coot? Maybe a modified version of the input pdb with the CA/peptide outlier status mapped to the B-factor and occupancy columns?


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