[phenixbb] Asymmetric unit content
Pavel Afonine
pafonine at lbl.gov
Mon Dec 12 07:06:35 PST 2016
You must have a tough supervisor then, I afraid -;) Or.. there may be
something else about the structure and data that makes your boss
suspicious... I suspect it is a 7A resolution thing?
Pavel
On 12/12/16 22:56, Sharan Karade wrote:
> I have calculated Mathews coefficient also, the probability shows five
> molecules in ASU. But it fails to convince my supervisor.
>
> On Mon, Dec 12, 2016 at 6:52 AM, <oleg at quantumbioinc.com
> <mailto:oleg at quantumbioinc.com>> wrote:
>
> Compute Matthews coefficient.
> e.g. using
> http://www.ruppweb.org/mattprob/default.html
> <http://www.ruppweb.org/mattprob/default.html>
>
> Oleg
>
>
>
> -----Original Message-----
> From: "Sharan Karade" <sharankarade at gmail.com
> <mailto:sharankarade at gmail.com>>
> Sent: Sunday, December 11, 2016 6:05am
> To: phenixbb at phenix-online.org <mailto:phenixbb at phenix-online.org>
> Subject: [phenixbb] Asymmetric unit content
>
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> Unsubscribe: phenixbb-leave at phenix-online.orgDear all,
>
> I have solved the structure in C121 space group, having
> five
> molecules in asymmetric unit, my supervisor have doubt about the fifth
> molecule becoz of poor density fit, if i delete the fifth
> molecule, there
> is a space for the molecule and crystal is not continuous, i
> calculated
> difference map from Phenix by deleting fifth molecule and got the Map
> showing presence of molecule. My supervisor want me to get SetMet
> data, but
> crystals are diffracting poor (7A). Is there any way to convince
> my guide.
>
>
> advance thanks for valuable suggestions.
>
> --
> Sharan
> C/O Dr. J V Pratap
> Senior Research Fellow,
> CSIR-Central Drug Research Institute,
> Lucknow
>
> Oleg Borbulevych, Ph.D.
> Staff Scientist
> QuantumBio, Inc.
> 2790 W. College Ave.
> State College, PA 16801
> E-mail: oborbulevych at yahoo.com <mailto:oborbulevych at yahoo.com>,
> oleg at quantumbioinc.com <mailto:oleg at quantumbioinc.com>
> Linkedin Professional Profile:
> http://www.linkedin.com/pub/oleg-borbulevych/22/454/b80
> <http://www.linkedin.com/pub/oleg-borbulevych/22/454/b80>
>
>
>
>
> --
> Sharan
> C/O Dr. J V Pratap
> Senior Research Fellow,
> CSIR-Central Drug Research Institute,
> Lucknow
>
>
>
>
>
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