[phenixbb] phenix fails to configure on fedora 20

[Dr. Robert Oeffner]

Dear Abhisek,

Version 1.10 is quite old and there have been several bug fixes and new features since then. We’re just about to release version 1.11 so the current nightly builds on the website should be quite stable. If you detect otherwise we would be interested to hear back. 

Regards,

Robert

From: abhisek Mondal 
Sent: Tuesday, November 1, 2016 5:07 PM
To: rdo20 at cam.ac.uk ; phenixbb at phenix-online.org 
Subject: RE: [phenixbb] phenix fails to configure on fedora 20

I'll try...
But, my concern is, when I tried to install the same version in my workstation it worked cool.
Is this some sort of issue with my laptop ?
Nightly builds are beta right ? Won't it cause any stability issue ?


On Nov 1, 2016 3:07 PM, <rdo20 at cam.ac.uk> wrote:

  Have you tried one of the recent nightly builds or the centos5 version?



  Rob



  Sent from my Windows 10 phone
  -- 
  Robert Oeffner, Ph.D.
  Research Associate, The Read Group
  Department of Haematology,
  Cambridge Institute for Medical Research
  University of Cambridge
  Cambridge Biomedical Campus
  Wellcome Trust/MRC Building
  Hills Road
  Cambridge CB2 0XY

  www.cimr.cam.ac.uk/investigators/read/index.html
  tel: +44(0)1223 763234
  mobile: +44(0)7712 887162



  From: abhisek Mondal
  Sent: 01 November 2016 07:39
  To: phenixbb at phenix-online.org
  Subject: [phenixbb] phenix fails to configure on fedora 20



  Hi,

  I'm using Fedora 20 on a 4 core laptop. When I tried to install phenix it gave following error.



  Same version installed fine in my workstation but keep failing here.



  Please help me out here.

  Thanks.





  [root at viralhost phenix-installer-1.10.1-2155-intel-linux-2.6-x86_64-centos6]# ./install 



      ==========================================================================

                            Phenix Installation



                            version: 1.10.1-2155

                       machine type: intel-linux-2.6

                         OS version: 3.19.8-100.fc20.i686

                        destination: /usr/local/phenix-1.10.1-2155

                    # of processors: 4

      =========================================================================

      

  Configuring Phenix components...

  Traceback (most recent call last):

    File "./bin/install.py", line 262, in <module>

      installer(sys.argv[1:]).install()

    File "/home/abhisek/phenix-installer-1.10.1-2155-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/install_distribution.py", line 185, in install

      self.install_from_binary()

    File "/home/abhisek/phenix-installer-1.10.1-2155-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/install_distribution.py", line 295, in install_from_binary

      self.reconfigure(log=log)

    File "/home/abhisek/phenix-installer-1.10.1-2155-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/install_distribution.py", line 460, in reconfigure

      call(args=args, log=log, verbose=self.options.verbose)

    File "/home/abhisek/phenix-installer-1.10.1-2155-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/installer_utils.py", line 81, in call

      raise RuntimeError("Call to '%s' failed with exit code %d" % (args, rc))

  RuntimeError: Call to '/usr/local/phenix-1.10.1-2155/base/bin/python /usr/local/phenix-1.10.1-2155/modules/cctbx_project/libtbx/configure.py --current_working_directory /usr/local/phenix-1.10.1-2155/build --command_version_suffix 1.10.1-2155 phenix phaser solve_resolve labelit' failed with exit code 126



  -- 

  Abhisek Mondal

  Research Fellow

  Structural Biology and Bioinformatics Division

  CSIR-Indian Institute of Chemical Biology

  Kolkata 700032

  INDIA


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