[phenixbb] Problems about AutoSol: too many HA sites identified.
Pavel Afonine
pafonine at lbl.gov
Mon Jul 9 14:32:33 PDT 2018
Hi Kaibo,
> 2. The 2Fo-Fc map and AutoBuild solution looked fine, but the Fo-Fc
> map is kinda noisy with positive peaks showing up within the
> main-chain density which causes troubles for refinement.
what contouring level you use to see Fo-Fc map? Note, usual "3 sigma" is
not universally optimal but depends on solvent content. Do you still see
lots of artifacts at say 0.35 or 0.4e/A**3 (mean solvent density) ?
Pavel
More information about the phenixbb
mailing list