[phenixbb] red blobs (Andrea Smith)

Kay Diederichs kay.diederichs at uni-konstanz.de
Thu Mar 14 15:11:05 PDT 2024


Hi Andrea,

in your case, phenix.refine seems to fill bulk solvent into volumes that 
are not actually filled by solvent.
It might help to optimize the mask, see 
https://phenix-online.org/documentation/reference/refinement.html#bulk-solvent-correction-and-anisotropic-scaling 
"6. Mask parameters".

Best,
Kay
-- 
Kay Diederichs                http://strucbio.biologie.uni-konstanz.de
email: Kay.Diederichs at uni-konstanz.de             Tel +49 7531 88 4049
Fachbereich Biologie, Universität Konstanz, Box M647, D-78457 Konstanz

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