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Hi Tom,<br>
<br>
don't we need to add "maps_only=True" as well (as Manual suggests in
section "Just make maps; don't do any building.";
<a class="moz-txt-link-freetext" href="http://www.phenix-online.org/documentation/autobuild.htm">http://www.phenix-online.org/documentation/autobuild.htm</a>) ? <br>
<br>
I'm asking because the original question was specific about it: compute
map and "nothing extra".<br>
<br>
Thanks,<br>
Pavel.<br>
<br>
On 10/13/2008 2:17 PM, Thomas C. Terwilliger wrote:
<blockquote
 cite="mid:21822.128.165.0.81.1223932630.squirrel@webmail.lanl.gov"
 type="cite">
  <pre wrap="">Hi Vladimir,
You can do this with:

phenix.autobuild data=data.mtz model=coords.pdb
composite_omit_type=sa_omit nproc=4

All the best,
Tom T


  </pre>
  <blockquote type="cite">
    <pre wrap="">After phenix.refine stage I would like to get just the sa_omit map for the
whole assymetric unit (nothing extra). How can I do it?
 Regards.
Vladimir



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