<html><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Pavel<div><br></div><div>Don't worry about this error as I reprocessed the data and started the refinement over and it doesn't seem to be causing an error when doing twin refinement with water picking. </div><div><br></div><div>I imagine it has something to do with using a def file from a previous phenix version. </div><div><br></div><div>FR</div><div><br><div><div>On Mar 25, 2009, at 3:04 PM, Pavel Afonine wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"> <div bgcolor="#ffffff" text="#000000"> Thanks for the files, I will have a look.<br> Pavel.<br> <br> <br> On 3/25/09 2:01 PM, Francis E Reyes wrote: <blockquote cite="mid:A4B1932E-7BA2-4A0D-B42B-92C5393C7A99@colorado.edu" type="cite">Command: <br> phenix.refine *004.def --overwrite --unused_ok refinement.input.xray_data.r_free_flags.generate=True <br> <br> <br> <br> and the def file is enclosed. <br> <br> <br> I turned off ordered_solvent and it seems to be working OK with the twin refinement (I can actually make it into simulated annealing). <br> <br> <br> <br> On Mar 25, 2009, at 3:00 PM, Pavel Afonine wrote: <br> <br> <blockquote type="cite"><br> </blockquote> <br> --------------------------------------------- <br> Francis Reyes M.Sc. <br> 215 UCB <br> University of Colorado at Boulder <br> <br> gpg --keyserver pgp.mit.edu --recv-keys 67BA8D5D <br> <br> 8AE2 F2F4 90F7 9640 28BC 686F 78FD 6669 67BA 8D5D <br> <br> <pre wrap=""><hr size="4" width="90%">
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</pre> </blockquote> </div> _______________________________________________<br>phenixbb mailing list<br><a href="mailto:phenixbb@phenix-online.org">phenixbb@phenix-online.org</a><br>http://www.phenix-online.org/mailman/listinfo/phenixbb<br></blockquote></div><br><div> <span class="Apple-style-span" style="border-collapse: separate; border-spacing: 0px 0px; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: auto; -khtml-text-decorations-in-effect: none; text-indent: 0px; -apple-text-size-adjust: auto; text-transform: none; orphans: 2; white-space: normal; widows: 2; word-spacing: 0px; "><div style="word-wrap: break-word; -khtml-nbsp-mode: space; -khtml-line-break: after-white-space; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">---------------------------------------------</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Francis Reyes M.Sc.</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">215 UCB</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">University of Colorado at Boulder</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">gpg --keyserver pgp.mit.edu --recv-keys 67BA8D5D</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">8AE2 F2F4 90F7 9640 28BC <span class="Apple-converted-space"> </span>686F 78FD 6669 67BA 8D5D</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><br class="khtml-block-placeholder"></div></div><br class="Apple-interchange-newline"></span> </div><br></div></body></html>