<html><head><style type="text/css"><!-- DIV {margin:0px;} --></style></head><body><div style="font-family:times new roman,new york,times,serif;font-size:12pt"><div>Hi all<br><br> I am trying to use phenix.automr to search for two component.<br><br>Tried command line...<br><br>phenix.automr data=out.sca ensemble_1.coords=a1.pdb \<br>ensemble_1.RMS=0.65 ensemble_1_copies_to_find=5 componenet_1_mass=25000 \<br>component_1.component_copies=5 ensemble_2.coords=a2.pdb \<br>ensemble_2.RMS=0.60 ensemble_2.copies_to_find=5 componenet_2_mass=20000 \<br>component_2.component_copies=5 <br><br>Following errors<br><br>phenix-installer-1.4-147/phenix-1.4-147/phenix/phenix/command_line/automr.py", line 483, in <module><br> run_automr=run_automr(args=sys.argv[1:])<br>phenix-installer-1.4-147/phenix-1.4-147/phenix/phenix/autosol/wizard_command_line.py", line 1237, in Sorry<br>
raise AssertionError,e<br>AssertionError: Sorry, unknown file or keyword: ensemble_1.coords=a1.pdb<br><br>Not sure , What is wrong in my command? <br><br>Also try to use the Gui, but in automr gui only seen option for data file , not for model? May I am<br>missing something?<br><br>Thanks<br><br><br></div><div style="font-family: times new roman,new york,times,serif; font-size: 12pt;"><a ymailto="mailto:1476.152.1.132.71.1252513056.squirrel@webmail.ncsu.edu" href="mailto:1476.152.1.132.71.1252513056.squirrel@webmail.ncsu.edu"></a><br></div></div><br>
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