Hi, <br>I have Zn atoms in my pdb for refinement. However, it failed with the following scripts. Do I have to create a libary of this heavy atom?<br>Number of atoms with unknown nonbonded energy type symbols: 6<br> "ATOM 1 Zn Zn Z 1 .*. Zn "<br>
"ATOM 2 Zn Zn Z 2 .*. Zn "<br> "ATOM 3 Zn Zn Z 3 .*. Zn "<br> "ATOM 4 Zn Zn Z 4 .*. Zn "<br> "ATOM 5 Zn Zn Z 5 .*. Zn "<br>
"ATOM 6 Zn Zn Z 6 .*. Zn "<br> Time building chain proxies: 1.78, per 1000 atoms: 0.45<br><br>Here is the format of my pdb:<br>.....<br>ATOM 1 Zn Zn Z 1 32.028 47.603 13.955 1.00 30.00 Zn<br>
ATOM 2 Zn Zn Z 2 29.017 71.434 8.164 1.00 30.00 Zn<br>ATOM 3 Zn Zn Z 3 39.223 49.330 -6.810 1.00 30.00 Zn<br>ATOM 4 Zn Zn Z 4 24.811 89.144 -4.406 1.00 30.00 Zn<br>
ATOM 5 Zn Zn Z 5 23.652 72.429 6.125 1.00 30.00 Zn<br>ATOM 6 Zn Zn Z 6 30.132 63.054 -31.918 1.00 30.00 Zn<br>TER 7 Zn 6<br>ATOM 10 CL CL L 1 20.125 63.405 10.719 1.00 30.00 CL<br>
TER 11 CL 1<br><br><br>