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Hi Sam,<br>
<br>
two ways:<br>
<br>
- ask phenix.refine to output X-plor formatted map. For example, to run
phenix.refine just to compute the map:<br>
<br>
phenix.refine model.pdb data.mtz main.number_of_mac=1 strategy=none
write_maps=true<br>
<br>
- use "Create maps" option from main PHENIX GUI that will alow you to
compute any map.<br>
<br>
Pavel.<br>
<br>
<br>
<br>
On 10/27/09 2:28 PM, Sam Stampfer wrote:
<blockquote
cite="mid:80e4ac3c0910271428w3b7dabf7md9e9e1c3e27a76f4@mail.gmail.com"
type="cite">Hi,<br>
<br>
This isn't exactly phenix-related but someone might know an easy
solution. I'm trying to open an electron density map in pymol. It
won't open .mtz files and the .xplor files I generated from ccp4i don't
seem to work either. I need to have my density as a .xplor file in
order for pymol to open it (I think). How would I generate a .xplor
file from .mtz? Or, alternately, how can I set phenix to output a
.xplor file? I've had it output to a cns file instead of .mtz but that
didn't help me get it in .xplor format.<br>
<br>
Thanks!<br>
-Sam<br>
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