Dear All<br><br>Greetings<br><br>I was searching for a ligand present in the active site of my protein using Ligand Search in "PHENIX"<br><br>but i stuck in between with an error :<br><br><br>A
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report to the PHENIX developers.<br>
<br><br>AttributeError : ligand_identification instance has no attribute 'connections'<br>Traceback:<br> File "/home/programs/linux/phenix-<div id=":47" class="ii gt">1.6.1-357/cctbx_project/libtbx/thread_utils.py", line 137, in run<br>
return_value = self._target(self._args, self._kwargs, self._c)<br><br> File "/home/programs/linux/phenix-1.6.1-357/cctbx_project/libtbx/runtime_utils.py", line 55, in __call__<br> result = self.target()<br>
<br> File "/home/programs/linux/phenix-1.6.1-357/phenix/phenix/command_line/ligand_identification.py", line 1769, in __call__<br> identify_ligands = ligand_identification(args=list(self.args), quiet=False)<br>
<br> File "/home/programs/linux/phenix-1.6.1-357/phenix/phenix/command_line/ligand_identification.py", line 308, in __init__<br> ligand_identification.Run(self, params)<br><br> File "/home/programs/linux/phenix-1.6.1-357/phenix/phenix/command_line/ligand_identification.py", line 1454, in Run<br>
return self.connections['STOP ']<br><br clear="all"><br>I am not able to identify the problem?<br><br>Please let me know if some one can identify the problem, i don't know whether it is a bug or problem in my files. <br>
<br>Thanks for your suggestions in advance.<br><br>Rajan <br></div><br clear="all"><br>-- <br>************************************************<br>Current Address:<br><br>Rajan Vyas<br>Research Scholar<br>Deptt. of Biotechnology<br>
Panjab University Chandigarh, India<br>160014 Mob. +919417374197<br>Fax: +91-172-2625254<br>************************************************<br>