<html><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Hi Abhishek,<div><br></div><div>I'm sorry for the trouble! This problem with non-standard space groups should be fixed, so if you download any recent version of PHENIX it should be ok. Please let me know if that doesn't do it!</div><div><br></div><div>All the best,</div><div>Tom T</div><div><br></div><div><br><div><div>On Jul 29, 2010, at 10:03 AM, abhishek dey wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><br><br> <div class="gmail_quote">---------- Forwarded message ----------<br>From: <b class="gmail_sendername">abhishek dey</b> <span dir="ltr"><<a href="mailto:41.abhishek@gmail.com">41.abhishek@gmail.com</a>></span><br>Date: 29 July 2010 21:27<br> Subject: autobuild failure<br>To: <a href="mailto:phenixbb@phenix-online.org">phenixbb@phenix-online.org</a><br><br><br> <div>Dear all,</div> <div> I am facing some problem while running the Autobuild option for PHENIX-1.6-289 version. I uploaded the mtz file, sequence of my protein and the pdb file and started running AUTOBUILD. but the program stopped with the following error message </div> <div><div style="margin-top: 0cm; margin-right: 0cm; margin-bottom: 0pt; margin-left: 0cm; "><span lang="EN-US"><font size="3" face="Batang">SG: P 2 21 21</font></span></div><p style="MARGIN: 0cm 0cm 0pt" class="MsoNormal"><font size="3" face="Batang"></font></p><div style="margin-top: 0cm; margin-right: 0cm; margin-bottom: 0pt; margin-left: 0cm; "><span lang="EN-US"><font size="3" face="Batang">Cell: [49.539999999999999, 99.140000000000001, 144.41999999999999, 90.0, 90.0, 90.0]</font></span></div><p style="MARGIN: 0cm 0cm 0pt" class="MsoNormal"><font size="3" face="Batang"></font></p><div style="margin-top: 0cm; margin-right: 0cm; margin-bottom: 0pt; margin-left: 0cm; "><span lang="EN-US"><font size="3" face="Batang">Inverse hand of space group:<span style="mso-spacerun: yes"> </span>P 2 21 21</font></span></div><p style="MARGIN: 0cm 0cm 0pt" class="MsoNormal"><font size="3" face="Batang"></font></p><div style="margin-top: 0cm; margin-right: 0cm; margin-bottom: 0pt; margin-left: 0cm; "><span lang="EN-US"><font size="3" face="Batang">Creating sg entry from<span style="mso-spacerun: yes"> </span>/data/dey/2779/rv2779p22121_sort2.mtz</font></span></div><p style="MARGIN: 0cm 0cm 0pt" class="MsoNormal"><font size="3" face="Batang"></font></p><div style="margin-top: 0cm; margin-right: 0cm; margin-bottom: 0pt; margin-left: 0cm; "><span lang="EN-US"><font size="3" face="Batang">Unit cell: (49.54, 99.14, 144.42, 90, 90, 90)</font></span></div><p style="MARGIN: 0cm 0cm 0pt" class="MsoNormal"><font size="3" face="Batang"></font></p><div style="margin-top: 0cm; margin-right: 0cm; margin-bottom: 0pt; margin-left: 0cm; "><span lang="EN-US"><font size="3" face="Batang">Space group: P 2 21 21 (No. 18)</font></span></div><p style="MARGIN: 0cm 0cm 0pt" class="MsoNormal"><font size="3" face="Batang"></font></p><div style="margin-top: 0cm; margin-right: 0cm; margin-bottom: 0pt; margin-left: 0cm; "><span lang="EN-US"><font size="3" face="Batang">Space group name is:<span style="mso-spacerun: yes"> </span>P 2 21 21<span style="mso-spacerun: yes"> </span>symbol is: p22121</font></span></div><p style="MARGIN: 0cm 0cm 0pt" class="MsoNormal"><font size="3" face="Batang"></font></p><p style="MARGIN: 0cm 0cm 0pt" class="MsoNormal"><span lang="EN-US"><font size="3" face="Batang"> </font></span></p><p style="MARGIN: 0cm 0cm 0pt" class="MsoNormal"><span lang="EN-US"><font size="3" face="Batang"> </font></span></p><div style="margin-top: 0cm; margin-right: 0cm; margin-bottom: 0pt; margin-left: 0cm; "><span lang="EN-US"><font size="3" face="Batang">****************************************</font></span></div><p style="MARGIN: 0cm 0cm 0pt" class="MsoNormal"><font size="3" face="Batang"></font></p><div style="margin-top: 0cm; margin-right: 0cm; margin-bottom: 0pt; margin-left: 0cm; "><span lang="EN-US"><font size="3" face="Batang">AutoBuild Input failed</font></span></div><p style="MARGIN: 0cm 0cm 0pt" class="MsoNormal"><font size="3" face="Batang"></font></p><div style="margin-top: 0cm; margin-right: 0cm; margin-bottom: 0pt; margin-left: 0cm; "><span lang="EN-US"><font size="3" face="Batang">Need a symfile for solve</font></span></div><p style="MARGIN: 0cm 0cm 0pt" class="MsoNormal"></p></div> <div>.the working spacegroup is P 2 21 21 it will be helpful if someone give useful suggestion on this. <br clear="all">thanks in advance<br>-- <br><font color="#888888">Abhishek Dey</font></div></div><br><br clear="all"> <br><br> _______________________________________________<br>phenixbb mailing list<br><a href="mailto:phenixbb@phenix-online.org">phenixbb@phenix-online.org</a><br>http://phenix-online.org/mailman/listinfo/phenixbb<br></blockquote></div><br><div apple-content-edited="true"> <span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div><div><div><div><div><br>Thomas C. Terwilliger<br>Mail Stop M888<br>Los Alamos National Laboratory<br>Los Alamos, NM 87545<br><br>Tel: 505-667-0072 email: <a href="mailto:terwilliger@LANL.gov">terwilliger@LANL.gov</a><br>Fax: 505-665-3024 SOLVE web site: <a href="http://solve.lanl.gov">http://solve.lanl.gov</a><br>PHENIX web site: http:<a href="http://www.phenix-online.org">www.phenix-online.org</a><br>ISFI Integrated Center for Structure and Function Innovation web site: <a href="http://techcenter.mbi.ucla.edu">http://techcenter.mbi.ucla.edu</a><br>TB Structural Genomics Consortium web site: <a href="http://www.doe-mbi.ucla.edu/TB">http://www.doe-mbi.ucla.edu/TB</a></div><div>CBSS Center for Bio-Security Science web site: <a href="http://www.lanl.gov/cbss">http://www.lanl.gov/cbss</a><br><br></div></div></div></div><br></div></div></span><br class="Apple-interchange-newline"> </div><br></div></body></html>