<div>Thanks for the reply and suggestions.</div>
<div> </div>
<div>regards</div>
<div>intekhab Alam<br><br></div>
<div class="gmail_quote">On Tue, Dec 13, 2011 at 2:07 PM, Nathaniel Echols <span dir="ltr"><<a href="mailto:nechols@lbl.gov">nechols@lbl.gov</a>></span> wrote:<br>
<blockquote style="BORDER-LEFT:#ccc 1px solid;MARGIN:0px 0px 0px 0.8ex;PADDING-LEFT:1ex" class="gmail_quote">
<div class="im">On Mon, Dec 12, 2011 at 8:58 PM, intekhab alam <<a href="mailto:faisaldbg@gmail.com">faisaldbg@gmail.com</a>> wrote:<br>> i want to make one clarification here that clashes appear when i used the<br>
> mtz file generated by CCP4 along with the MR solution from Phaser in Refmac<br>> 5. Refinemnet is fine in Phenix with R and Rfree of 25/30.<br><br></div>Sorry, I'm not sure what would cause the clashes - hopefully someone<br>
on ccp4bb will have an answer. (It could simply be a result of the<br>X-ray/geometry weighting not being correct - a sure sign of this,<br>regardless of program used, is excessively high RMS(bonds) and<br>RMS(angles).) I'm glad Phenix is working though!<br>
<div class="im"><br>> i am using Phenix 1.7.1.743.<br><br></div>FYI, you should update to 1.7.3 - the geometry may be significantly<br>improved at this resolution.<br>
<div class="HOEnZb">
<div class="h5"><br>-Nat<br>_______________________________________________<br>phenixbb mailing list<br><a href="mailto:phenixbb@phenix-online.org">phenixbb@phenix-online.org</a><br><a href="http://phenix-online.org/mailman/listinfo/phenixbb" target="_blank">http://phenix-online.org/mailman/listinfo/phenixbb</a><br>
</div></div></blockquote></div><br><br clear="all"><br>-- <br>INTEKHAB ALAM<br>LABORATORY OF STRUCTURAL BIOINFORMATICS<br>KOREA UNIVERSITY, SEOUL<br>