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<div style="direction: ltr;font-family: Tahoma;color: #000000;font-size: 10pt;">Hi Ursula,
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<div>If everything goes right, you should find the file:</div>
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<div> AutoBuild_run_1_/OMIT/resolve_composite_map.mtz</div>
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<div>which is your omit map.</div>
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<div>Let me know if that does not exist.</div>
<div>All the best,</div>
<div>Tom T</div>
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<div id="divRpF200953" style="direction: ltr; "><font face="Tahoma" size="2" color="#000000"><b>From:</b> phenixbb-bounces@phenix-online.org [phenixbb-bounces@phenix-online.org] on behalf of Ursula Schulze-Gahmen [uschulze-gahmen@lbl.gov]<br>
<b>Sent:</b> Wednesday, March 07, 2012 1:12 PM<br>
<b>To:</b> PHENIX user mailing list<br>
<b>Subject:</b> [phenixbb] autobuild omit map as Fo-Fc<br>
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<div>I calculated an omit-map for my model using the following command inpt:<br>
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phenix.autobuild data=HKL2000+R.mtz model=ptefb_A4_refine_43.pdb omit_region_specification=omit_around_pdb omit_box_pdb_list=G_chain.pdb composite_omit_type=refine_omit maps_only=true<br>
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I would like to display a 2Fo-Fc and Fo-Fc map but I cannot find the <br>
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overall_best_refine_map_coeffs.mtz output file that should have these coefficients according to the manual. I only see the overall_best_denmod_map_coeffs.mtz file.
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Can somebody tell how to best get to an omit Fo-Fc or 2Fo-Fc map?<br>
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Thanks<br>
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Ursula<br clear="all">
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-- <br>
Ursula Schulze-Gahmen, Ph.D.<br>
Assistant Researcher<br>
UC Berkeley, QB3<br>
356 Stanley Hall #3220<br>
Berkeley, CA 94720-3220<br>
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