Please see my response to this question from Wednesday:<div><br></div><div><a href="http://www.phenix-online.org/pipermail/phenixbb/2012-July/018842.html">http://www.phenix-online.org/pipermail/phenixbb/2012-July/018842.html</a></div>
<div><br></div><div>-Nat<br><br><div class="gmail_quote">On Fri, Jul 27, 2012 at 6:20 AM, Afshan Begum <span dir="ltr"><<a href="mailto:afshan490@yahoo.com" target="_blank">afshan490@yahoo.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div><div style="font-size:12pt;font-family:times new roman,new york,times,serif"><div><span>Dear Experts</span></div>
<div>
<br><span></span></div><div><span>I am <span><span>refining</span></span>
my structures in windows mode and every time i got this crash message i
do not know how to solve this issue? If any one encountered this
problem kindly suggest me how to solve it. While when i refine with <span>refmac</span> the file proceeds smoothly but i want to <span><span>refinement</span></span> in phenix due to utilize some parameters.</span></div>
<div><br><span></span></div><span></span><div><span></span> <span>its end like this:<br></span></div><div><br><span></span></div><br><div>Exporting results ==============================<br><br>Writing refined structure to PDB file:<br>
� C:\Documents and Settings\pc user\Desktop\Refine_2\jbu_refine_2.pdb<br>n_use����������� =� 7514<br>n_use_u_both���� =� 7514<br>n_use_u_iso����� =� 0<br>n_use_u_aniso��� =� 0<br>n_grad_site����� =�
0<br>n_grad_u_iso���� =� 0<br>n_grad_u_aniso�� =� 0<br>n_grad_occupancy
=� 331<br>n_grad_fp������� =� 0<br>n_grad_fdp������ =� 0<br>total number of scatterers =� 7514<br><br>After that its not produce the map file and gave errore crash mesage.<br><div>�<img alt="" height="591" width="573"><span></span><font color="#40007f"><span style><span style="font-weight:bold"></span></span></font></div>
</div><span style="font-weight:bold"><module></span><br style="font-weight:bold"><div style="font-weight:bold">Bus error (Python call stack above)<br>� � � � � � � � This crash may be due to a problem in any imported<br>
� � � � � � � � Python module, including modules which are not part<br>� � � � � � � � of the cctbx project. To disable the traps leading<br>� � � � �
� � � to this message, define these environment variables<br>� � � � � � � � (e.g. assign the value 1):<br>� � � � � � � � � � BOOST_ADAPTBX_FPE_DEFAULT<br>� � � � � � � � � � BOOST_ADAPTBX_SIGNALS_DEFAULT<br>� � � � � � � � This will NOT solve the problem, just mask it, but<br>
� � � � � � � � may allow you to proceed in case it is not critical.</div><div><font color="#40007f"><br><span style><span style="font-weight:bold"></span></span></font><div><span>Your suggestion highly obliged<br></span></div>
<div><br><span></span></div>
<span>I would be very thankful to you</span><span class="HOEnZb"><font color="#888888"><font color="#40007f"><span style><span style="font-weight:bold"></span></span><br><br style="font-weight:bold"><span style="font-weight:bold">AFSHAN</span><br>
</font></font></span></div><div><font color="#40007f"></font></div><br><div><font color="#40007f"></font></div></div></div><br>_______________________________________________<br>
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<br></blockquote></div><br></div>